Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13708 and 13709 are separated by 646 nucleotides13709 and 13710 are separated by 237 nucleotides13710 and 13711 are separated by 833 nucleotides13711 and 13712 are separated by 37 nucleotides mRNA_5340: 13708 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 493,002 to 494,592 13708 mRNA_5341: 13709 - KOG0692 Pentafunctional AROM protein, at 495,239 to 496,655 13709 mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496,893 to 498,783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499,617 to 502,031 13711 mRNA_5344: 13712 - KOG4176 Uncharacterized conserved protein, at 502,069 to 503,147 13712
Group Condition mRNA_5340 mRNA_5341 mRNA_5342 mRNA_5343 mRNA_5344
13708 13709 13710 13711 13712
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.7 -0.4 -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 -0.2 -0.1 -0.3
growth on ypd YPD -0.5 -0.0 +0.0 -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.3 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.5 -0.3 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.4 -0.1 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.1 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.1 +0.3 +0.2
auxotrophy Dropout Complete -0.1 +0.0 -0.0 +0.3 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.1 -0.0 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.0 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 -0.0 -0.1 +0.6
growth on oleic acid YNB Oleic Acid -0.0 +0.1 -0.1 +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 +0.3 +0.4 -0.2
growth on oleic acid YNB Glucose +0.0 +0.0 -0.2 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.4 -0.1 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -0.2 +0.3 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 +0.5 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.3 +0.3 +0.1
auxotrophy YNB Glucose -0.1 -0.1 +0.2 +0.3 +0.5
remove
mRNA_5340
plot
remove
mRNA_5341
plot
remove
mRNA_5342
remove
mRNA_5343
plot
remove
mRNA_5344
plot