Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13709 and 13710 are separated by 237 nucleotides13710 and 13711 are separated by 833 nucleotides13711 and 13712 are separated by 37 nucleotides13712 and 13713 are separated by 223 nucleotides mRNA_5341: 13709 - KOG0692 Pentafunctional AROM protein, at 495,239 to 496,655 13709 mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496,893 to 498,783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499,617 to 502,031 13711 mRNA_5344: 13712 - KOG4176 Uncharacterized conserved protein, at 502,069 to 503,147 13712 mRNA_5345: 13713 - Hypothetical Protein, at 503,371 to 504,560 13713
Group Condition mRNA_5341 mRNA_5342 mRNA_5343 mRNA_5344 mRNA_5345
13709 13710 13711 13712 13713
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.4 -0.3 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.3 -0.1 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.1 +0.4 N.D.
growth on ypd YPD -0.0 +0.0 -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0 -0.1 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.3 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.1 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.0 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.4 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.1 +1.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.3 +0.2 N.D.
auxotrophy Dropout Complete +0.0 -0.0 +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 +0.3 +0.4 N.D.
growth on oleic acid YNB Glucose +0.0 -0.2 +0.5 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 +0.3 +0.1 N.D.
auxotrophy YNB Glucose -0.1 +0.2 +0.3 +0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.5 +0.3 +0.1 N.D.
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