Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13710 and 13711 are separated by 833 nucleotides13711 and 13712 are separated by 37 nucleotides13712 and 13713 are separated by 223 nucleotides13713 and 13714 are separated by 233 nucleotides mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496,893 to 498,783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499,617 to 502,031 13711 mRNA_5344: 13712 - KOG4176 Uncharacterized conserved protein, at 502,069 to 503,147 13712 mRNA_5345: 13713 - Hypothetical Protein, at 503,371 to 504,560 13713 mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504,794 to 508,994 13714
Group Condition mRNA_5342 mRNA_5343 mRNA_5344 mRNA_5345 mRNA_5346
13710 13711 13712 13713 13714
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.3 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 -0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.3 N.D. -0.1
growth on ypd YPD +0.0 -0.0 +0.0 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 +0.3 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.6 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.4 N.D. -0.1
auxotrophy Dropout Complete -0.0 +0.3 +0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 +0.1 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.3 +0.4 N.D. -0.1
growth on oleic acid YNB Glucose -0.2 +0.5 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 +0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.4 -0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 +1.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.6 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.3 +0.1 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.3 +0.1 N.D. +0.1
auxotrophy YNB Glucose +0.2 +0.3 +0.5 N.D. +0.1
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