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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13712 and 13713 are separated by 223 nucleotides
13713 and 13714 are separated by 233 nucleotides
13714 and 13715 are separated by 889 nucleotides
13715 and 13716 are separated by 1119 nucleotides
mRNA_5344: 13712 - KOG4176 Uncharacterized conserved protein, at 502,069 to 503,147
13712
mRNA_5345: 13713 - Hypothetical Protein, at 503,371 to 504,560
13713
mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504,794 to 508,994
13714
mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509,884 to 511,420
13715
mRNA_5348: 13716 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 512,540 to 514,284
13716
Group
Condition
mRNA
_5344
mRNA
_5345
mRNA
_5346
mRNA
_5347
mRNA
_5348
13712
13713
13714
13715
13716
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
-0.1
-0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
+0.0
-0.2
+0.1
growth on ypd
YPD
+0.0
N.D.
-0.2
-0.4
+0.2
auxotrophy
Dropout Complete
+0.0
N.D.
-0.1
-0.3
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
+0.0
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
-0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
-0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.1
-0.2
+0.2
growth on oleic acid
YNB Glucose
+0.2
N.D.
-0.1
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
N.D.
-0.1
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
N.D.
+0.0
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
+0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
N.D.
+0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
+0.0
+0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
N.D.
-0.1
+0.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.3
-0.1
+0.3
auxotrophy
YNB Glucose
+0.5
N.D.
+0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
-0.1
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
N.D.
+0.1
-0.0
+0.0
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