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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13714 and 13715 are separated by 889 nucleotides
13715 and 13716 are separated by 1119 nucleotides
13716 and 13717 are separated by 133 nucleotides
13717 and 13718 are separated by 444 nucleotides
mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504,794 to 508,994
13714
mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509,884 to 511,420
13715
mRNA_5348: 13716 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 512,540 to 514,284
13716
mRNA_5349: 13717 - K17427 MRPL46 large subunit ribosomal protein L46, at 514,418 to 515,269
13717
mRNA_5350: 13718 - K20310 TRAPPC13 trafficking protein particle complex subunit 13, at 515,714 to 517,641
13718
Group
Condition
mRNA
_5346
mRNA
_5347
mRNA
_5348
mRNA
_5349
mRNA
_5350
13714
13715
13716
13717
13718
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.2
+0.1
N.D.
-0.1
growth on ypd
YPD
-0.2
-0.4
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.0
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.4
+0.0
N.D.
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.1
+0.3
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
+0.1
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.1
+0.2
-0.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
-0.2
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
+0.3
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
+0.0
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
+0.1
N.D.
-0.2
auxotrophy
YNB Glucose
+0.1
-0.1
+0.3
N.D.
+0.0
auxotrophy
Dropout Complete
-0.1
-0.3
+0.3
N.D.
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
+0.1
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
+0.3
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.6
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
+0.3
N.D.
+0.1
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