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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13722 and 13723 are separated by 240 nucleotides
13723 and 13724 are separated by 630 nucleotides
13724 and 13725 are separated by 153 nucleotides
13725 and 13726 are separated by 307 nucleotides
mRNA_5354: 13722 - KOG0557 Dihydrolipoamide acetyltransferase, at 527,210 to 528,729
13722
mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528,970 to 530,546
13723
mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531,177 to 533,794
13724
mRNA_5357: 13725 - HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335, at 533,948 to 534,977
13725
mRNA_5358: 13726 - Hypothetical Protein, at 535,285 to 536,423
13726
Group
Condition
mRNA
_5354
mRNA
_5355
mRNA
_5356
mRNA
_5357
mRNA
_5358
13722
13723
13724
13725
13726
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
+0.1
-0.0
+0.1
N.D.
growth on oleic acid
YNB Glucose
-1.2
-0.0
-0.0
+0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
+0.1
+0.0
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.2
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+1.0
-0.3
-0.6
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
-0.3
-0.2
N.D.
auxotrophy
Dropout Complete
-0.3
+0.2
-0.1
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.5
-0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
-0.1
+0.6
N.D.
auxotrophy
YNB Glucose
+0.2
+0.2
-0.0
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
-0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.5
-0.3
+0.0
N.D.
growth on ypd
YPD
+0.4
-0.3
-0.1
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.2
-0.2
+0.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.8
-0.3
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.3
-0.6
-0.0
+0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.7
+0.4
+0.0
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.9
+0.2
+0.0
+0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.4
+0.8
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+1.2
+0.1
+0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.4
+0.1
+0.1
+0.5
N.D.
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