Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13726 and 13727 are separated by 314 nucleotides13727 and 13728 are separated by 537 nucleotides13728 and 13729 are separated by 539 nucleotides13729 and 13730 are separated by 265 nucleotides mRNA_5358: 13726 - Hypothetical Protein, at 535,285 to 536,423 13726 mRNA_5359: 13727 - KOG0254 Predicted transporter (major facilitator superfamily), at 536,738 to 538,804 13727 mRNA_5360: 13728 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 539,342 to 540,520 13728 mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541,060 to 542,859 13729 mRNA_5362: 13730 - Hypothetical Protein, at 543,125 to 544,034 13730
Group Condition mRNA_5358 mRNA_5359 mRNA_5360 mRNA_5361 mRNA_5362
13726 13727 13728 13729 13730
ypd buoyancy 40 hrs High Buoyancy N.D. -0.8 -0.1 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.8 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.4 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 +0.3 N.D. +0.0
auxotrophy Dropout Complete N.D. -0.3 -0.0 N.D. +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 N.D. -0.0
growth on ypd YPD N.D. +0.3 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 +0.1 N.D. -0.2
auxotrophy YNB Glucose N.D. -0.1 +0.4 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.7 -0.6 N.D. -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 -0.4 N.D. +0.1
growth on oleic acid YNB Glucose N.D. +0.4 +0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 -0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.4 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.3 N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. +0.6 +0.3 N.D. -0.1
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