Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13727 and 13728 are separated by 537 nucleotides13728 and 13729 are separated by 539 nucleotides13729 and 13730 are separated by 265 nucleotides13730 and 13731 are separated by 295 nucleotides mRNA_5359: 13727 - KOG0254 Predicted transporter (major facilitator superfamily), at 536,738 to 538,804 13727 mRNA_5360: 13728 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 539,342 to 540,520 13728 mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541,060 to 542,859 13729 mRNA_5362: 13730 - Hypothetical Protein, at 543,125 to 544,034 13730 mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544,330 to 546,394 13731
Group Condition mRNA_5359 mRNA_5360 mRNA_5361 mRNA_5362 mRNA_5363
13727 13728 13729 13730 13731
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.3 N.D. +0.1 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation +1.7 -0.6 N.D. -0.9 -2.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 N.D. +0.0 -1.5
growth on ypd YPD +0.3 -0.0 N.D. -0.2 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.4 N.D. +0.1 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.4 N.D. +0.0 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.3 N.D. +0.0 -0.9
growth on oleic acid YNB Oleic Acid -0.0 -0.1 N.D. -0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.1 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 N.D. -0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.2 N.D. +0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 N.D. -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 N.D. -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 N.D. -0.0 -0.5
auxotrophy Dropout Complete -0.3 -0.0 N.D. +0.0 +0.5
growth on oleic acid YNB Glucose +0.4 +0.1 N.D. -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 N.D. +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 N.D. -0.0 +1.1
auxotrophy YNB Glucose -0.1 +0.4 N.D. -0.1 +1.3
growth on ricinoleic acid YNB Glucose +0.6 +0.3 N.D. -0.1 +1.7
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