Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13728 and 13729 are separated by 539 nucleotides13729 and 13730 are separated by 265 nucleotides13730 and 13731 are separated by 295 nucleotides13731 and 13732 are separated by 290 nucleotides mRNA_5360: 13728 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 539,342 to 540,520 13728 mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541,060 to 542,859 13729 mRNA_5362: 13730 - Hypothetical Protein, at 543,125 to 544,034 13730 mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544,330 to 546,394 13731 mRNA_5364: 13732 - KOG1630 Growth hormone-induced protein and related proteins, at 546,685 to 547,952 13732
Group Condition mRNA_5360 mRNA_5361 mRNA_5362 mRNA_5363 mRNA_5364
13728 13729 13730 13731 13732
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -0.9 -2.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 -1.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.0 -1.5 +0.1
growth on ypd YPD -0.0 N.D. -0.2 -1.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. +0.0 -0.8 -0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.1 -0.7 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.1 -1.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.2 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.9 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 -0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.0 -0.9 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.0 -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.0 -0.3 -0.2
growth on oleic acid YNB Glucose +0.1 N.D. -0.2 +0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -0.0 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.0 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.2 +0.2 +0.0
auxotrophy Dropout Complete -0.0 N.D. +0.0 +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.0 +1.1 -0.2
auxotrophy YNB Glucose +0.4 N.D. -0.1 +1.3 -0.1
growth on ricinoleic acid YNB Glucose +0.3 N.D. -0.1 +1.7 -0.2
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