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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13731 and 13732 are separated by 290 nucleotides
13732 and 13733 are separated by 448 nucleotides
13733 and 13734 are separated by 477 nucleotides
13734 and 13735 are separated by 402 nucleotides
mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544,330 to 546,394
13731
mRNA_5364: 13732 - KOG1630 Growth hormone-induced protein and related proteins, at 546,685 to 547,952
13732
mRNA_5365: 13733 - K00107 ALO D-arabinono-1,4-lactone oxidase, at 548,401 to 550,040
13733
mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550,518 to 551,881
13734
mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552,284 to 555,242
13735
Group
Condition
mRNA
_5363
mRNA
_5364
mRNA
_5365
mRNA
_5366
mRNA
_5367
13731
13732
13733
13734
13735
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
-0.1
-0.3
-0.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-2.0
-0.2
+0.3
+0.1
-0.0
growth on ypd
YPD
-1.3
-0.1
+0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.4
-0.1
+0.0
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
+0.2
+0.2
-0.8
+0.3
growth on oleic acid
YNB Oleic Acid
-0.7
-0.3
-0.1
+0.5
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
+0.0
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.5
+0.1
-0.1
+0.3
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.1
-0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
-0.0
+0.0
-0.1
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.7
-0.1
+0.1
+0.6
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
+0.0
+0.6
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
-0.4
+0.4
-0.1
growth on oleic acid
YNB Glucose
+0.4
-0.3
+0.0
+0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.2
-0.2
+0.8
+0.3
auxotrophy
Dropout Complete
+0.5
-0.1
+0.3
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.0
+0.7
+0.0
growth on ricinoleic acid
YNB Glucose
+1.7
-0.2
-0.2
+0.3
+0.1
auxotrophy
YNB Glucose
+1.3
-0.1
+0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
-0.2
-0.0
+1.1
-0.1
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