Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13734 and 13735 are separated by 402 nucleotides13735 and 13736 are separated by 370 nucleotides13736 and 13737 are separated by 518 nucleotides13737 and 13738 are separated by 524 nucleotides mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550,518 to 551,881 13734 mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552,284 to 555,242 13735 mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555,613 to 556,991 13736 mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557,510 to 559,067 13737 mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559,592 to 565,388 13738
Group Condition mRNA_5366 mRNA_5367 mRNA_5368 mRNA_5369 mRNA_5370
13734 13735 13736 13737 13738
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.0 -0.4 +0.1 -2.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.3 -0.0 -1.4
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 +0.2 -0.7 -0.2
growth on oleic acid YNB Glucose +0.3 -0.1 +0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.4 +0.3 -0.2 -0.7
growth on ypd YPD -0.1 -0.4 +0.3 +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.2 +0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 +0.3 -0.1 -0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.7 +0.0 -0.4 +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.5 -0.4 +0.1 +0.0 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.6 -0.2 +0.1 +1.7 -0.7
auxotrophy Dropout Complete +0.3 -0.2 +0.3 +1.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 +1.9 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 -0.1 +0.2 +0.1 +1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 +0.3 +0.1 +1.3 +1.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.5 +0.2 -0.2 +2.2
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.2 -0.0 +1.6 +0.5
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.0 +0.9 +1.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.7 +2.3 -0.1
auxotrophy YNB Glucose +0.4 +0.1 +0.7 +1.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.6 +0.4 +0.6 +3.1
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