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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13741 and 13742 are separated by 74 nucleotides
13742 and 13743 are separated by 5336 nucleotides
13743 and 13744 are separated by 124 nucleotides
13744 and 13745 are separated by 5849 nucleotides
mRNA_5373: 13741 - Hypothetical Protein, at 571,063 to 571,885
13741
mRNA_5374: 13742 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 571,960 to 573,012
13742
mRNA_5375: 13743 - Hypothetical Protein, at 578,349 to 578,853
13743
mRNA_5376: 13744 - Hypothetical Protein, at 578,978 to 581,367
13744
mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101
13745
Group
Condition
mRNA
_5373
mRNA
_5374
mRNA
_5375
mRNA
_5376
mRNA
_5377
13741
13742
13743
13744
13745
auxotrophy
Dropout Complete
-0.4
-0.2
-0.4
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
-0.8
+0.6
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.5
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
-0.3
-0.2
+0.4
growth on oleic acid
YNB Oleic Acid
-0.4
-0.4
+0.1
+0.0
-0.1
growth on oleic acid
YNB Glucose
-0.4
-0.7
+0.3
+0.2
+0.1
growth on ypd
YPD
-0.2
+0.5
-0.6
-0.2
+0.1
auxotrophy
YNB Glucose
-0.4
-0.0
-0.1
-0.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.4
+0.5
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
+0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.1
+0.2
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
+0.0
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
+0.2
-0.2
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
+0.5
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.1
+0.3
-0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.3
+0.6
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.3
+0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
+0.6
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.2
+0.5
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.1
+1.0
+0.3
+0.1
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