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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13742 and 13743 are separated by 5336 nucleotides
13743 and 13744 are separated by 124 nucleotides
13744 and 13745 are separated by 5849 nucleotides
13745 and 13746 are separated by 2989 nucleotides
mRNA_5374: 13742 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 571,960 to 573,012
13742
mRNA_5375: 13743 - Hypothetical Protein, at 578,349 to 578,853
13743
mRNA_5376: 13744 - Hypothetical Protein, at 578,978 to 581,367
13744
mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101
13745
mRNA_5378: 13746 - Hypothetical Protein, at 593,091 to 593,885
13746
Group
Condition
mRNA
_5374
mRNA
_5375
mRNA
_5376
mRNA
_5377
mRNA
_5378
13742
13743
13744
13745
13746
auxotrophy
Dropout Complete
-0.2
-0.4
-0.3
+0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.2
-0.0
-0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.1
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.5
+0.1
-0.1
-0.0
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
-0.2
+0.4
+0.3
growth on ypd
YPD
+0.5
-0.6
-0.2
+0.1
+0.3
growth on oleic acid
YNB Glucose
-0.7
+0.3
+0.2
+0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.5
-0.1
+0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.5
-0.0
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.4
+0.1
+0.0
-0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.6
+0.1
-0.2
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.5
-0.1
+0.0
+0.4
auxotrophy
YNB Glucose
-0.0
-0.1
-0.2
+0.3
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-0.0
+0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
-0.2
+0.4
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.5
+0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.1
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.2
-0.2
+0.3
+1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.6
-0.2
+0.0
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.6
-0.1
+0.2
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+1.0
+0.3
+0.1
+0.4
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