Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13743 and 13744 are separated by 124 nucleotides
13744 and 13745 are separated by 5849 nucleotides
13745 and 13746 are separated by 2989 nucleotides
13746 and 13747 are separated by 201 nucleotides
mRNA_5375: 13743 - Hypothetical Protein, at 578,349 to 578,853
13743
mRNA_5376: 13744 - Hypothetical Protein, at 578,978 to 581,367
13744
mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101
13745
mRNA_5378: 13746 - Hypothetical Protein, at 593,091 to 593,885
13746
mRNA_5379: 13747 - K12829 SF3B2, SAP145, CUS1 splicing factor 3B subunit 2, at 594,087 to 596,220
13747
Group
Condition
mRNA
_5375
mRNA
_5376
mRNA
_5377
mRNA
_5378
mRNA
_5379
13743
13744
13745
13746
13747
growth on ypd
YPD
-0.6
-0.2
+0.1
+0.3
N.D.
auxotrophy
Dropout Complete
-0.4
-0.3
+0.2
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.1
+0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.2
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.1
+0.2
-0.5
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
+0.4
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.0
-0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.0
+0.4
N.D.
auxotrophy
YNB Glucose
-0.1
-0.2
+0.3
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.0
+0.0
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
+0.4
+0.4
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.1
+0.5
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.2
+0.2
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.1
+0.0
+0.4
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.2
+0.1
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
+0.2
+0.6
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.1
-0.2
+0.6
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.2
+0.0
+0.9
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.2
+0.3
+1.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
-0.1
+0.2
+0.7
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+1.0
+0.3
+0.1
+0.4
N.D.
remove
mRNA_5375
plot
remove
mRNA_5376
plot
remove
mRNA_5377
remove
mRNA_5378
plot
remove
mRNA_5379
plot