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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13744 and 13745 are separated by 5849 nucleotides
13745 and 13746 are separated by 2989 nucleotides
13746 and 13747 are separated by 201 nucleotides
13747 and 13748 are separated by 124 nucleotides
mRNA_5376: 13744 - Hypothetical Protein, at 578,978 to 581,367
13744
mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101
13745
mRNA_5378: 13746 - Hypothetical Protein, at 593,091 to 593,885
13746
mRNA_5379: 13747 - K12829 SF3B2, SAP145, CUS1 splicing factor 3B subunit 2, at 594,087 to 596,220
13747
mRNA_5380: 13748 - K17782 MIA40, CHCHD4 mitochondrial intermembrane space import and assembly protein 40, at 596,345 to 597,306
13748
Group
Condition
mRNA
_5376
mRNA
_5377
mRNA
_5378
mRNA
_5379
mRNA
_5380
13744
13745
13746
13747
13748
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
-0.5
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.0
-0.2
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
+0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.0
N.D.
N.D.
growth on ypd
YPD
-0.2
+0.1
+0.3
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
-0.2
N.D.
N.D.
auxotrophy
Dropout Complete
-0.3
+0.2
+0.3
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
+0.4
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
+0.3
N.D.
N.D.
auxotrophy
YNB Glucose
-0.2
+0.3
+0.3
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.4
+0.3
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
-0.1
+0.5
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.6
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.4
+0.4
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
+0.9
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
+0.7
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.6
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
+1.1
N.D.
N.D.
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