Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13744 and 13745 are separated by 5849 nucleotides13745 and 13746 are separated by 2989 nucleotides13746 and 13747 are separated by 201 nucleotides13747 and 13748 are separated by 124 nucleotides mRNA_5376: 13744 - Hypothetical Protein, at 578,978 to 581,367 13744 mRNA_5377: 13745 - Hypothetical Protein, at 587,217 to 590,101 13745 mRNA_5378: 13746 - Hypothetical Protein, at 593,091 to 593,885 13746 mRNA_5379: 13747 - K12829 SF3B2, SAP145, CUS1 splicing factor 3B subunit 2, at 594,087 to 596,220 13747 mRNA_5380: 13748 - K17782 MIA40, CHCHD4 mitochondrial intermembrane space import and assembly protein 40, at 596,345 to 597,306 13748
Group Condition mRNA_5376 mRNA_5377 mRNA_5378 mRNA_5379 mRNA_5380
13744 13745 13746 13747 13748
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.0 N.D. N.D.
growth on ypd YPD -0.2 +0.1 +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 -0.2 N.D. N.D.
auxotrophy Dropout Complete -0.3 +0.2 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 +0.4 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 +0.3 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.4 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 +0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 +0.4 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 +0.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 +0.9 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 +1.1 N.D. N.D.
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