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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13748 and 13749 are separated by 255 nucleotides
13749 and 13750 are separated by 10738 nucleotides
13750 and 13751 are separated by 3620 nucleotides
13751 and 13752 are separated by 1353 nucleotides
mRNA_5380: 13748 - K17782 MIA40, CHCHD4 mitochondrial intermembrane space import and assembly protein 40, at 596,345 to 597,306
13748
mRNA_5381: 13749 - Hypothetical Protein, at 597,562 to 598,053
13749
mRNA_5382: 13750 - Hypothetical Protein, at 608,792 to 609,334
13750
mRNA_5383: 13751 - Hypothetical Protein, at 612,955 to 613,540
13751
mRNA_5384: 13752 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 614,894 to 615,202
13752
Group
Condition
mRNA
_5380
mRNA
_5381
mRNA
_5382
mRNA
_5383
mRNA
_5384
13748
13749
13750
13751
13752
auxotrophy
YNB Glucose
N.D.
-0.5
-0.8
+0.1
-0.6
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.7
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
-0.7
+0.2
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.9
+0.1
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
+0.1
+0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.4
-0.4
+0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.5
-0.3
-0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
-0.0
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
-0.3
-0.2
+0.0
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.1
-0.1
-0.2
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.2
-0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.5
+0.0
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.7
+0.3
+0.2
-0.7
growth on ypd
YPD
N.D.
+0.6
+0.7
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.7
+0.4
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
+0.2
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.5
+0.6
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.9
+0.5
+0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
+0.8
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.6
+0.6
+0.3
+0.3
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