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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13749 and 13750 are separated by 10738 nucleotides
13750 and 13751 are separated by 3620 nucleotides
13751 and 13752 are separated by 1353 nucleotides
13752 and 13753 are separated by 4059 nucleotides
mRNA_5381: 13749 - Hypothetical Protein, at 597,562 to 598,053
13749
mRNA_5382: 13750 - Hypothetical Protein, at 608,792 to 609,334
13750
mRNA_5383: 13751 - Hypothetical Protein, at 612,955 to 613,540
13751
mRNA_5384: 13752 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 614,894 to 615,202
13752
mRNA_5385: 13753 - Hypothetical Protein, at 619,262 to 620,433
13753
Group
Condition
mRNA
_5381
mRNA
_5382
mRNA
_5383
mRNA
_5384
mRNA
_5385
13749
13750
13751
13752
13753
growth on oleic acid
YNB Oleic Acid
-0.4
-0.7
-0.0
-0.5
-0.2
auxotrophy
YNB Glucose
-0.5
-0.8
+0.1
-0.6
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.1
+0.1
-0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.3
-0.1
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.1
+0.4
-0.8
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.7
+0.2
-0.7
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
+0.2
-0.4
+0.3
growth on oleic acid
YNB Glucose
+0.0
-0.1
-0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
+0.0
+0.0
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
-0.1
+0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.0
+0.0
-0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.0
+0.0
-0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.7
+0.4
-0.0
-0.4
-0.3
auxotrophy
Dropout Complete
+0.2
-0.2
+0.0
-0.1
+0.4
growth on ypd
YPD
+0.6
+0.7
-0.2
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.3
+0.2
-0.7
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.9
+0.5
+0.2
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.2
+0.4
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.6
+0.1
+0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.8
+0.0
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.6
+0.3
+0.3
+0.4
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