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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13750 and 13751 are separated by 3620 nucleotides
13751 and 13752 are separated by 1353 nucleotides
13752 and 13753 are separated by 4059 nucleotides
13753 and 13754 are separated by 38 nucleotides
mRNA_5382: 13750 - Hypothetical Protein, at 608,792 to 609,334
13750
mRNA_5383: 13751 - Hypothetical Protein, at 612,955 to 613,540
13751
mRNA_5384: 13752 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 614,894 to 615,202
13752
mRNA_5385: 13753 - Hypothetical Protein, at 619,262 to 620,433
13753
mRNA_5386: 13754 - Hypothetical Protein, at 620,472 to 621,845
13754
Group
Condition
mRNA
_5382
mRNA
_5383
mRNA
_5384
mRNA
_5385
mRNA
_5386
13750
13751
13752
13753
13754
growth on oleic acid
YNB Oleic Acid
-0.7
-0.0
-0.5
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.0
-0.4
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.8
+0.0
+0.3
+0.2
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.0
-0.0
+0.4
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
+0.0
-0.2
+0.5
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
-0.1
+0.5
growth on ypd
YPD
+0.7
-0.2
-0.4
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.5
+0.2
-0.3
-0.4
+0.3
auxotrophy
YNB Glucose
-0.8
+0.1
-0.6
+0.4
+1.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.8
+0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.2
-0.7
+0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
-0.4
+0.0
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.7
+0.2
-0.7
+0.4
+1.6
growth on ricinoleic acid
YNB Glucose
-0.2
+0.0
+0.0
-0.0
+1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
+0.2
-0.2
+1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.4
+0.2
-0.2
+0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.2
-0.4
+0.3
+1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.1
+0.0
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.3
+0.3
+0.4
+0.4
auxotrophy
Dropout Complete
-0.2
+0.0
-0.1
+0.4
+2.2
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