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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13753 and 13754 are separated by 38 nucleotides
13754 and 13755 are separated by 2466 nucleotides
13755 and 13756 are separated by 3186 nucleotides
13756 and 13757 are separated by 150 nucleotides
mRNA_5385: 13753 - Hypothetical Protein, at 619,262 to 620,433
13753
mRNA_5386: 13754 - Hypothetical Protein, at 620,472 to 621,845
13754
mRNA_5387: 13755 - Hypothetical Protein, at 624,312 to 624,933
13755
mRNA_5388: 13756 - K02931 RP-L5, MRPL5, rplE large subunit ribosomal protein L5, at 628,120 to 629,112
13756
mRNA_5389: 13757 - KOG0750 Mitochondrial solute carrier protein, at 629,263 to 631,005
13757
Group
Condition
mRNA
_5385
mRNA
_5386
mRNA
_5387
mRNA
_5388
mRNA
_5389
13753
13754
13755
13756
13757
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-1.4
+0.2
N.D.
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
+0.0
N.D.
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.4
+0.3
N.D.
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.1
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.1
+0.5
-0.1
N.D.
-0.6
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
+0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.5
-0.1
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.3
+0.2
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.3
-0.2
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
-0.0
+1.0
-0.4
N.D.
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.4
N.D.
-0.1
growth on ypd
YPD
-0.0
+0.1
-0.5
N.D.
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+1.2
-0.6
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.6
-0.1
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.5
+0.6
N.D.
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.6
+0.1
N.D.
-0.2
auxotrophy
YNB Glucose
+0.4
+1.1
-0.2
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.4
+0.3
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+1.3
+0.5
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+1.6
+0.2
N.D.
+0.1
auxotrophy
Dropout Complete
+0.4
+2.2
-0.1
N.D.
+0.1
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