Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13759 and 13760 are separated by 1716 nucleotides13760 and 13761 are separated by 1577 nucleotides mRNA_5391: 13759 - HMMPfam-ATP synthase j chain-PF04911, at 634,388 to 634,888 13759 mRNA_5392: 13760 - KOG0166 Karyopherin (importin) alpha, at 636,605 to 638,927 13760 mRNA_5393: 13761 - KOG0603 Ribosomal protein S6 kinase, at 640,505 to 641,434 13761
Group Condition mRNA_5391 mRNA_5392 mRNA_5393
13759 13760 13761
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3
growth on oleic acid YNB Glucose N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1
auxotrophy Dropout Complete N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0
auxotrophy YNB Glucose N.D. N.D. -0.0
growth on ypd YPD N.D. N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2
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