Fitness for 4 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13762 and 13763 are separated by 73 nucleotides13763 and 13764 are separated by 94 nucleotides13764 and 13765 are separated by 337 nucleotides mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1,074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1,148 to 1,997 13763 mRNA_5396: 13764 - KOG4567 GTPase-activating protein, at 2,092 to 5,786 13764 mRNA_5397: 13765 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 6,124 to 7,635 13765
Group Condition mRNA_5394 mRNA_5395 mRNA_5396 mRNA_5397
13762 13763 13764 13765
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.2 +0.3
auxotrophy Dropout Complete -0.1 -0.2 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.0 -0.0
auxotrophy YNB Glucose -0.1 -0.2 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.0 +0.3
growth on ypd YPD +0.1 +0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 -0.0 -0.0
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 -0.3 +1.2
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.1 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 +0.0 +1.3
remove
mRNA_5394
plot
remove
mRNA_5395
remove
mRNA_5396
plot
remove
mRNA_5397
plot