Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13762 and 13763 are separated by 73 nucleotides13763 and 13764 are separated by 94 nucleotides13764 and 13765 are separated by 337 nucleotides13765 and 13766 are separated by 441 nucleotides mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1,074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1,148 to 1,997 13763 mRNA_5396: 13764 - KOG4567 GTPase-activating protein, at 2,092 to 5,786 13764 mRNA_5397: 13765 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 6,124 to 7,635 13765 mRNA_5398: 13766 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 8,077 to 11,128 13766
Group Condition mRNA_5394 mRNA_5395 mRNA_5396 mRNA_5397 mRNA_5398
13762 13763 13764 13765 13766
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 +0.1 -0.2 -0.5
auxotrophy YNB Glucose -0.1 -0.2 -0.3 +0.2 -0.6
auxotrophy Dropout Complete -0.1 -0.2 -0.2 +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.2 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 +0.0 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 +0.4 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.2 +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -0.2 +0.5 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.2 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.2 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.0 +0.3 +0.2
growth on ypd YPD +0.1 +0.1 -0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 -0.0 -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 -0.3 +1.2 -0.6
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 +0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 +0.0 +1.3 -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.1 +0.7 +0.1
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