Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13766 and 13767 are separated by 555 nucleotides13767 and 13768 are separated by 576 nucleotides13768 and 13769 are separated by 244 nucleotides13769 and 13770 are separated by 375 nucleotides mRNA_5398: 13766 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 8,077 to 11,128 13766 mRNA_5399: 13767 - K07078 K07078 uncharacterized protein, at 11,684 to 12,574 13767 mRNA_5400: 13768 - K07786 emrY MFS transporter, DHA2 family, multidrug resistance protein, at 13,151 to 15,531 13768 mRNA_5401: 13769 - HMMPfam-Complex 1 protein (LYR family)-PF05347, at 15,776 to 16,734 13769 mRNA_5402: 13770 - KOG2938 Predicted inosine-uridine preferring nucleoside hydrolase, at 17,110 to 18,696 13770
Group Condition mRNA_5398 mRNA_5399 mRNA_5400 mRNA_5401 mRNA_5402
13766 13767 13768 13769 13770
auxotrophy YNB Glucose -0.6 -0.3 -0.1 -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.8 +0.3 -0.6 +0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.5 -0.2 -0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.6 +0.4 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.2 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.2 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 -0.1 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.3 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.2 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.3 -0.1 -0.2 +0.1
auxotrophy Dropout Complete -0.5 -0.1 -0.2 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 -0.5 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 +0.2 -0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.4 -0.1 -0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.4 -0.1 +0.8 -0.0
growth on oleic acid YNB Glucose -0.2 -0.0 +0.2 +0.7 -0.1
growth on ypd YPD +0.2 -0.4 -0.1 +0.6 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.3 +0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.6 +0.3 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +1.0 -0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.6 +0.3 +0.1 +0.4
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