Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 13772 and 13773 are separated by 119 nucleotides13773 and 13774 are separated by 145 nucleotides13774 and 13775 are separated by 91 nucleotides13775 and 13776 are separated by 275 nucleotides mRNA_5404: 13772 - Hypothetical Protein, at 22,508 to 23,850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23,970 to 26,723 13773 mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26,869 to 28,382 13774 mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28,474 to 30,165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30,441 to 31,506 13776
Group Condition mRNA_5404 mRNA_5405 mRNA_5406 mRNA_5407 mRNA_5408
13772 13773 13774 13775 13776
auxotrophy Dropout Complete +0.1 -0.2 -0.0 N.D. -0.3
auxotrophy YNB Glucose +0.2 -0.4 +0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.2 -0.0 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 -0.1 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.1 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 +0.3 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.3 -0.3 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 +0.3 N.D. +0.2
growth on ypd YPD -0.0 +0.4 +0.2 N.D. -0.0
growth on oleic acid YNB Glucose +0.2 -0.1 +0.2 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.2 N.D. +0.7
growth on ricinoleic acid YNB Glucose +0.7 -0.3 -0.1 N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.1 -0.2 N.D. +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.2 -0.1 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.4 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.6 +0.4 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.6 +0.7 N.D. +0.3
remove
mRNA_5404
plot		 remove
mRNA_5405
plot		 remove
mRNA_5406		 remove
mRNA_5407
plot		 remove
mRNA_5408
plot