Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13773 and 13774 are separated by 145 nucleotides13774 and 13775 are separated by 91 nucleotides13775 and 13776 are separated by 275 nucleotides13776 and 13777 are separated by 1240 nucleotides mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23,970 to 26,723 13773 mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26,869 to 28,382 13774 mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28,474 to 30,165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30,441 to 31,506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32,747 to 36,067 13777
Group Condition mRNA_5405 mRNA_5406 mRNA_5407 mRNA_5408 mRNA_5409
13773 13774 13775 13776 13777
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 N.D. -0.2 -0.0
auxotrophy YNB Glucose -0.4 +0.1 N.D. -0.1 +0.0
auxotrophy Dropout Complete -0.2 -0.0 N.D. -0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 N.D. +0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 N.D. -0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.3 N.D. +0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 N.D. -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. +0.7 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 N.D. +0.5 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.1 N.D. +0.5 +0.4
growth on oleic acid YNB Glucose -0.1 +0.2 N.D. +0.3 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.2 N.D. +0.7 +0.0
growth on ypd YPD +0.4 +0.2 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 N.D. +0.4 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.5 N.D. +0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.4 N.D. +0.5 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.7 N.D. +0.3 +0.4
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