Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13774 and 13775 are separated by 91 nucleotides13775 and 13776 are separated by 275 nucleotides13776 and 13777 are separated by 1240 nucleotides13777 and 13778 are separated by 993 nucleotides mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26,869 to 28,382 13774 mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28,474 to 30,165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30,441 to 31,506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32,747 to 36,067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37,061 to 38,634 13778
Group Condition mRNA_5406 mRNA_5407 mRNA_5408 mRNA_5409 mRNA_5410
13774 13775 13776 13777 13778
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.2 -0.0 N.D.
auxotrophy Dropout Complete -0.0 N.D. -0.3 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.0 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.2 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 -0.1 N.D.
auxotrophy YNB Glucose +0.1 N.D. -0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.0 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.5 -0.2 N.D.
growth on ypd YPD +0.2 N.D. -0.0 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.7 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.5 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. +0.3 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.5 +0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.7 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. +0.4 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. +0.3 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. +0.5 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. +0.3 +0.4 N.D.
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