Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13776 and 13777 are separated by 1240 nucleotides13777 and 13778 are separated by 993 nucleotides13778 and 13779 are separated by 545 nucleotides13779 and 13780 are separated by 175 nucleotides mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30,441 to 31,506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32,747 to 36,067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37,061 to 38,634 13778 mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39,180 to 41,133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41,309 to 43,272 13780
Group Condition mRNA_5408 mRNA_5409 mRNA_5410 mRNA_5411 mRNA_5412
13776 13777 13778 13779 13780
auxotrophy Dropout Complete -0.3 +0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose -0.1 +0.0 N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.2 N.D. N.D. -0.2
growth on ypd YPD -0.0 +0.1 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.3 +0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.7 +0.0 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.5 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.3 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.5 +0.4 N.D. N.D. -0.0
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