Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13777 and 13778 are separated by 993 nucleotides13778 and 13779 are separated by 545 nucleotides13779 and 13780 are separated by 175 nucleotides13780 and 13781 are separated by 550 nucleotides mRNA_5409: 13777 - Hypothetical Protein, at 32,747 to 36,067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37,061 to 38,634 13778 mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39,180 to 41,133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41,309 to 43,272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43,823 to 46,039 13781
Group Condition mRNA_5409 mRNA_5410 mRNA_5411 mRNA_5412 mRNA_5413
13777 13778 13779 13780 13781
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. N.D. +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. -0.2 +0.2
auxotrophy Dropout Complete +0.0 N.D. N.D. -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.0 N.D. N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. N.D. +0.0 +0.1
auxotrophy YNB Glucose +0.0 N.D. N.D. -0.0 +0.1
growth on oleic acid YNB Glucose +0.1 N.D. N.D. -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. +0.2 -0.0
growth on ypd YPD +0.1 N.D. N.D. +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. N.D. +0.3 +0.2
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 N.D. N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. N.D. +0.1 +0.2
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