Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13779 and 13780 are separated by 175 nucleotides13780 and 13781 are separated by 550 nucleotides13781 and 13782 are separated by 122 nucleotides13782 and 13783 are separated by 1067 nucleotides mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39,180 to 41,133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41,309 to 43,272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43,823 to 46,039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46,162 to 47,875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48,943 to 50,652 13783
Group Condition mRNA_5411 mRNA_5412 mRNA_5413 mRNA_5414 mRNA_5415
13779 13780 13781 13782 13783
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.2 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.2 -0.4 +0.0
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 -0.5 +0.2
growth on ypd YPD N.D. +0.1 +0.1 -0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.2 +0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.1 -0.3 +0.1
auxotrophy Dropout Complete N.D. -0.2 +0.0 -0.0 +0.1
auxotrophy YNB Glucose N.D. -0.0 +0.1 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 +0.1 -0.1
growth on oleic acid YNB Glucose N.D. -0.1 +0.2 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.1 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.2 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.1 -0.2 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.0 +0.0 +0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.2 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.2 +0.3 -0.1
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