Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13780 and 13781 are separated by 550 nucleotides13781 and 13782 are separated by 122 nucleotides13782 and 13783 are separated by 1067 nucleotides13783 and 13784 are separated by 1849 nucleotides mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41,309 to 43,272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43,823 to 46,039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46,162 to 47,875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48,943 to 50,652 13783 mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52,502 to 53,852 13784
Group Condition mRNA_5412 mRNA_5413 mRNA_5414 mRNA_5415 mRNA_5416
13780 13781 13782 13783 13784
growth on ypd YPD +0.1 +0.1 -0.0 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 +0.1 -0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.5 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -0.1 -0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 +0.2 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 +0.1 -0.1 -0.1
auxotrophy Dropout Complete -0.2 +0.0 -0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 -0.3 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.0 +0.0 +0.1
auxotrophy YNB Glucose -0.0 +0.1 -0.1 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -0.4 +0.0 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.0 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 +0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 -0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.1 +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.2 +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.0 +0.0 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.1 +0.1 +0.2
growth on oleic acid YNB Glucose -0.1 +0.2 -0.3 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.2 +0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 +0.3 -0.1 +0.9
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