Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13781 and 13782 are separated by 122 nucleotides13782 and 13783 are separated by 1067 nucleotides13783 and 13784 are separated by 1849 nucleotides13784 and 13785 are separated by 145 nucleotides mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43,823 to 46,039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46,162 to 47,875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48,943 to 50,652 13783 mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52,502 to 53,852 13784 mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53,998 to 56,725 13785
Group Condition mRNA_5413 mRNA_5414 mRNA_5415 mRNA_5416 mRNA_5417
13781 13782 13783 13784 13785
growth on ypd YPD +0.1 -0.0 -0.5 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.1 +0.2 -0.4
auxotrophy YNB Glucose +0.1 -0.1 +0.1 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 -0.5 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 +0.0 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.2 +0.4 +0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.5 +0.2 +0.2 +0.0
auxotrophy Dropout Complete +0.0 -0.0 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 -0.0 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.2 -0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.0 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.1 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 +0.0 +0.6 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.1 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 +0.1 -0.0 +0.2
growth on oleic acid YNB Glucose +0.2 -0.3 +0.3 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +0.3 +0.2 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.0 +0.2 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.0 +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 -0.1 +0.9 +0.4
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