Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
13786 and 13787 are separated by 305 nucleotides
13787 and 13788 are separated by 350 nucleotides
13788 and 13789 are separated by 449 nucleotides
13789 and 13790 are separated by 250 nucleotides
mRNA_5418: 13786 - K01502 E3.5.5.7 aliphatic nitrilase, at 56,919 to 58,432
13786
mRNA_5419: 13787 - Interpro Cut8, nuclear proteasome tether protein, at 58,738 to 60,106
13787
mRNA_5420: 13788 - Hypothetical Protein, at 60,457 to 62,427
13788
mRNA_5421: 13789 - Interpro Domain of unknown function (DUF5102) 0, at 62,877 to 64,571
13789
mRNA_5422: 13790 - HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744, at 64,822 to 65,544
13790
Group
Condition
mRNA
_5418
mRNA
_5419
mRNA
_5420
mRNA
_5421
mRNA
_5422
13786
13787
13788
13789
13790
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
+0.1
-0.5
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.2
-0.3
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
+0.1
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
+0.0
-0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
+0.2
-0.4
+0.1
growth on ypd
YPD
-0.0
+0.2
+0.1
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.5
+0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.6
-0.2
+0.7
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.5
-0.0
+0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.4
+0.1
+0.4
-0.0
auxotrophy
YNB Glucose
+0.1
+0.3
-0.1
+0.4
+0.2
auxotrophy
Dropout Complete
+0.1
+0.5
-0.2
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.1
+0.4
+0.7
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.9
+0.0
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+1.0
+0.2
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
-0.1
+1.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.4
+0.0
+1.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.4
+0.2
+1.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.4
+0.4
+1.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.5
+0.4
+1.2
-0.1
remove
mRNA_5418
plot
remove
mRNA_5419
plot
remove
mRNA_5420
remove
mRNA_5421
plot
remove
mRNA_5422
plot