Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13787 and 13788 are separated by 350 nucleotides13788 and 13789 are separated by 449 nucleotides13789 and 13790 are separated by 250 nucleotides13790 and 13791 are separated by 183 nucleotides mRNA_5419: 13787 - Interpro Cut8, nuclear proteasome tether protein, at 58,738 to 60,106 13787 mRNA_5420: 13788 - Hypothetical Protein, at 60,457 to 62,427 13788 mRNA_5421: 13789 - Interpro Domain of unknown function (DUF5102) 0, at 62,877 to 64,571 13789 mRNA_5422: 13790 - HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744, at 64,822 to 65,544 13790 mRNA_5423: 13791 - K01426 E3.5.1.4, amiE amidase, at 65,728 to 67,986 13791
Group Condition mRNA_5419 mRNA_5420 mRNA_5421 mRNA_5422 mRNA_5423
13787 13788 13789 13790 13791
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 -0.5 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 -0.3 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.1 -0.2 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.1 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.4 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.0 -0.1 +0.2 +0.1
growth on ypd YPD +0.2 +0.1 -0.3 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.0 +0.3 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.0 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.2 +0.7 -0.5 +0.1
auxotrophy YNB Glucose +0.3 -0.1 +0.4 +0.2 -0.1
auxotrophy Dropout Complete +0.5 -0.2 +0.7 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.4 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 +0.7 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +1.2 +0.0 -0.0
growth on oleic acid YNB Glucose +0.9 +0.0 +0.2 +0.1 +0.2
growth on oleic acid YNB Oleic Acid +1.0 +0.2 +0.2 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.0 +1.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.2 +1.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.4 +1.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.4 +1.2 +0.2 +0.0
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