Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13789 and 13790 are separated by 250 nucleotides13790 and 13791 are separated by 183 nucleotides13791 and 13792 are separated by 481 nucleotides13792 and 13793 are separated by 146 nucleotides mRNA_5421: 13789 - Interpro Domain of unknown function (DUF5102) 0, at 62,877 to 64,571 13789 mRNA_5422: 13790 - HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744, at 64,822 to 65,544 13790 mRNA_5423: 13791 - K01426 E3.5.1.4, amiE amidase, at 65,728 to 67,986 13791 mRNA_5424: 13792 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 68,468 to 70,424 13792 mRNA_5425: 13793 - K12735 PPIL4 peptidyl-prolyl cis-trans isomerase-like 4, at 70,571 to 72,264 13793
Group Condition mRNA_5421 mRNA_5422 mRNA_5423 mRNA_5424 mRNA_5425
13789 13790 13791 13792 13793
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.6 +0.1 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.2 +0.1 +0.4 -1.7
growth on ypd YPD -0.3 +0.2 +0.1 -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 +0.1 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 +0.1 -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.1 +0.2 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 +0.1 +0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 -0.0 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.0 -0.0 +0.5
auxotrophy YNB Glucose +0.4 +0.2 -0.1 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 +0.1 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.2 -0.1 -0.0 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 +0.1 +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.0 +0.2 -0.1 +0.3
auxotrophy Dropout Complete +0.7 +0.1 -0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 +0.2 +0.0 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.1 +0.2 +0.0 -0.0
growth on oleic acid YNB Glucose +0.2 +0.1 +0.2 -0.1 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.5 +0.1 +0.4 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +1.3 -0.2 -0.1 -0.1 +0.6
growth on ricinoleic acid YNB Glucose +1.2 +0.0 -0.0 +0.2 +0.4
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