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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13793 and 13794 are separated by 463 nucleotides
13794 and 13795 are separated by 322 nucleotides
13795 and 13796 are separated by 809 nucleotides
13796 and 13797 are separated by 116 nucleotides
mRNA_5425: 13793 - K12735 PPIL4 peptidyl-prolyl cis-trans isomerase-like 4, at 70,571 to 72,264
13793
mRNA_5426: 13794 - K06944 K06944 uncharacterized protein, at 72,728 to 74,932
13794
mRNA_5427: 13795 - Hypothetical Protein, at 75,255 to 76,663
13795
mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77,473 to 79,440
13796
mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79,557 to 82,396
13797
Group
Condition
mRNA
_5425
mRNA
_5426
mRNA
_5427
mRNA
_5428
mRNA
_5429
13793
13794
13795
13796
13797
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-0.0
-0.6
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.2
-0.0
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.2
+0.1
+0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.2
-0.3
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
+0.3
+0.1
-0.4
auxotrophy
Dropout Complete
-0.0
-0.1
+0.1
-0.2
-0.0
growth on ypd
YPD
-0.3
-0.2
+0.6
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
+0.1
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.1
+0.3
-0.0
auxotrophy
YNB Glucose
-0.1
-0.1
+0.0
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.0
-0.1
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.0
+0.0
+0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.5
-0.2
-0.2
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.2
+0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.1
+0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.2
+0.2
-0.0
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
+0.5
+0.4
+0.1
growth on ricinoleic acid
YNB Glucose
+0.4
+0.1
+0.1
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.0
+0.2
+0.3
+0.0
growth on oleic acid
YNB Glucose
+0.6
-0.1
-0.0
+0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.1
+0.1
+0.3
+0.3
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