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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13794 and 13795 are separated by 322 nucleotides
13795 and 13796 are separated by 809 nucleotides
13796 and 13797 are separated by 116 nucleotides
13797 and 13798 are separated by 230 nucleotides
mRNA_5426: 13794 - K06944 K06944 uncharacterized protein, at 72,728 to 74,932
13794
mRNA_5427: 13795 - Hypothetical Protein, at 75,255 to 76,663
13795
mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77,473 to 79,440
13796
mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79,557 to 82,396
13797
mRNA_5430: 13798 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 82,627 to 84,263
13798
Group
Condition
mRNA
_5426
mRNA
_5427
mRNA
_5428
mRNA
_5429
mRNA
_5430
13794
13795
13796
13797
13798
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.6
-0.1
-0.4
-0.1
auxotrophy
Dropout Complete
-0.1
+0.1
-0.2
-0.0
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
+0.2
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
+0.1
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
+0.1
+0.0
-0.4
auxotrophy
YNB Glucose
-0.1
+0.0
+0.2
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
-0.1
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
+0.3
-0.3
-0.0
growth on ypd
YPD
-0.2
+0.6
-0.0
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
+0.1
-0.3
+0.7
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.2
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.2
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.3
-0.0
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
+0.4
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
+0.3
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
+0.0
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.1
-0.0
+0.3
+0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
+0.3
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
-0.0
+0.4
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.5
+0.4
+0.1
-0.1
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