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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13795 and 13796 are separated by 809 nucleotides
13796 and 13797 are separated by 116 nucleotides
13797 and 13798 are separated by 230 nucleotides
13798 and 13799 are separated by 164 nucleotides
mRNA_5427: 13795 - Hypothetical Protein, at 75,255 to 76,663
13795
mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77,473 to 79,440
13796
mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79,557 to 82,396
13797
mRNA_5430: 13798 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 82,627 to 84,263
13798
mRNA_5431: 13799 - KOG1296 Uncharacterized conserved protein, at 84,428 to 85,305
13799
Group
Condition
mRNA
_5427
mRNA
_5428
mRNA
_5429
mRNA
_5430
mRNA
_5431
13795
13796
13797
13798
13799
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.1
-0.4
-0.1
+0.1
auxotrophy
Dropout Complete
+0.1
-0.2
-0.0
-0.7
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.2
-0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
-0.4
-0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
-0.3
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
-0.0
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
-0.3
+0.7
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
-0.1
+0.1
-0.2
auxotrophy
YNB Glucose
+0.0
+0.2
-0.1
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.1
+0.0
-0.4
+0.4
growth on ypd
YPD
+0.6
-0.0
-0.2
-0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
+0.0
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.4
+0.1
-0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.0
+0.4
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-0.2
+0.2
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
-0.0
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.4
+0.2
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.0
+0.3
+0.1
+0.3
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.0
+0.4
+0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
+0.3
+0.1
+0.3
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