Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13800 and 13801 are separated by 642 nucleotides13801 and 13802 are separated by 194 nucleotides13802 and 13803 are separated by 117 nucleotides13803 and 13804 are separated by 1264 nucleotides mRNA_5432: 13800 - Hypothetical Protein, at 86,010 to 86,874 13800 mRNA_5433: 13801 - BLAST UPF0658 Golgi apparatus membrane protein [Termitomyce..., at 87,517 to 89,164 13801 mRNA_5434: 13802 - KOG2852 Possible oxidoreductase, at 89,359 to 90,914 13802 mRNA_5435: 13803 - Hypothetical Protein, at 91,032 to 92,817 13803 mRNA_5436: 13804 - Hypothetical Protein, at 94,082 to 95,346 13804
Group Condition mRNA_5432 mRNA_5433 mRNA_5434 mRNA_5435 mRNA_5436
13800 13801 13802 13803 13804
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.4 +0.0 -1.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2 -0.0 +0.3 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -0.2 +0.0 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 +0.0 +0.0 -1.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.1 +0.1 -0.7
auxotrophy YNB Glucose -0.1 -0.1 -0.2 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.3 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 -0.2 +0.1 -0.1
auxotrophy Dropout Complete -0.6 -0.1 -0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 +0.0 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -0.2 +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.1 +0.2 +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 +0.1 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.0 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -0.2 +0.1 +0.5 -1.0
growth on ricinoleic acid YNB Glucose +0.3 -0.2 +0.2 +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 +0.1 +0.3 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.3 +0.3 +0.1
growth on oleic acid YNB Glucose -0.2 +0.0 +0.3 +0.3 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.1 +0.3 +0.2 +0.3
growth on ypd YPD +1.0 -0.3 +0.5 -0.0 +1.7
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