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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
13802 and 13803 are separated by 117 nucleotides
13803 and 13804 are separated by 1264 nucleotides
13804 and 13805 are separated by 2 nucleotides
13805 and 13806 are separated by 344 nucleotides
mRNA_5434: 13802 - KOG2852 Possible oxidoreductase, at 89,359 to 90,914
13802
mRNA_5435: 13803 - Hypothetical Protein, at 91,032 to 92,817
13803
mRNA_5436: 13804 - Hypothetical Protein, at 94,082 to 95,346
13804
mRNA_5437: 13805 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 95,349 to 95,702
13805
mRNA_5438: 13806 - K06867 K06867 uncharacterized protein, at 96,047 to 99,541
13806
Group
Condition
mRNA
_5434
mRNA
_5435
mRNA
_5436
mRNA
_5437
mRNA
_5438
13802
13803
13804
13805
13806
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.0
-1.4
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
-0.7
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.3
-1.0
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
-0.7
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.0
-1.3
N.D.
+0.7
auxotrophy
YNB Glucose
-0.2
+0.0
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.5
-1.0
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.6
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
-0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.3
-0.4
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
-0.3
N.D.
-0.0
auxotrophy
Dropout Complete
-0.2
+0.1
+0.4
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
+0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
+0.3
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.2
+0.3
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.4
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
+0.3
+0.3
+0.1
N.D.
+0.0
growth on oleic acid
YNB Glucose
+0.3
+0.3
+0.6
N.D.
-0.1
growth on ypd
YPD
+0.5
-0.0
+1.7
N.D.
+0.1
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