Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13808 and 13809 are separated by 208 nucleotides13809 and 13810 are separated by 847 nucleotides13810 and 13811 are separated by 144 nucleotides13811 and 13812 are separated by 188 nucleotides mRNA_5440: 13808 - Hypothetical Protein, at 101,462 to 101,965 13808 mRNA_5441: 13809 - Hypothetical Protein, at 102,174 to 103,025 13809 mRNA_5442: 13810 - HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708, at 103,873 to 106,982 13810 mRNA_5443: 13811 - KOG3085 Predicted hydrolase (HAD superfamily), at 107,127 to 108,436 13811 mRNA_5444: 13812 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 108,625 to 109,612 13812
Group Condition mRNA_5440 mRNA_5441 mRNA_5442 mRNA_5443 mRNA_5444
13808 13809 13810 13811 13812
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 -2.3 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 -1.9 +0.1 +0.0
auxotrophy Dropout Complete N.D. +0.1 -1.8 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 -1.3 -0.2 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -1.3 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -1.4 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.8 -0.2 +0.4
growth on ypd YPD N.D. +0.2 -0.6 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.7 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -1.2 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.0 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.1 +0.1 -0.3
auxotrophy YNB Glucose N.D. +0.8 -1.0 +0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.5 +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.4 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.5 +0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.3 -0.2 +0.1
growth on oleic acid YNB Glucose N.D. +0.2 -0.2 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 +1.3 +0.4 +0.1
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