Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13813 and 13814 are separated by 649 nucleotides13814 and 13815 are separated by 30 nucleotides13815 and 13816 are separated by 479 nucleotides13816 and 13817 are separated by 206 nucleotides mRNA_5445: 13813 - K07513 ACAA1 acetyl-CoA acyltransferase 1, at 110,701 to 112,520 13813 mRNA_5446: 13814 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 113,170 to 113,689 13814 mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113,720 to 116,134 13815 mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116,614 to 117,202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117,409 to 118,509 13817
Group Condition mRNA_5445 mRNA_5446 mRNA_5447 mRNA_5448 mRNA_5449
13813 13814 13815 13816 13817
growth on oleic acid YNB Oleic Acid -2.5 N.D. +0.3 -0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 N.D. -0.2 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 N.D. -0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.2 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.1 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 -0.2 -0.1
auxotrophy Dropout Complete -0.3 N.D. -0.2 +0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.1 -0.0 -0.1
auxotrophy YNB Glucose -0.1 N.D. -0.2 +0.0 -0.0
growth on ypd YPD +0.2 N.D. -0.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.0 -0.5 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.7 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.1 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 -0.3 +0.3
growth on oleic acid YNB Glucose -0.3 N.D. +0.2 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. +0.6 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.8 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.7 -0.1 +0.2
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