Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13814 and 13815 are separated by 30 nucleotides13815 and 13816 are separated by 479 nucleotides13816 and 13817 are separated by 206 nucleotides13817 and 13818 are separated by 314 nucleotides mRNA_5446: 13814 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 113,170 to 113,689 13814 mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113,720 to 116,134 13815 mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116,614 to 117,202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117,409 to 118,509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118,824 to 121,253 13818
Group Condition mRNA_5446 mRNA_5447 mRNA_5448 mRNA_5449 mRNA_5450
13814 13815 13816 13817 13818
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.2 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.2 +0.1 -0.2
auxotrophy Dropout Complete N.D. -0.2 +0.0 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.0 -0.1 -0.2
auxotrophy YNB Glucose N.D. -0.2 +0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -0.5 +0.2 -0.1
growth on ypd YPD N.D. -0.1 -0.1 -0.2 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 +0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.1 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.2 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.6 -0.4 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.3 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.7 -0.2 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.1 +0.3 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.0 +0.3 -0.2
growth on oleic acid YNB Glucose N.D. +0.2 -0.0 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.7 -0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.8 -0.2 +0.1 -0.1
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