Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13816 and 13817 are separated by 206 nucleotides13817 and 13818 are separated by 314 nucleotides13818 and 13819 are separated by 1187 nucleotides13819 and 13820 are separated by 486 nucleotides mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116,614 to 117,202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117,409 to 118,509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118,824 to 121,253 13818 mRNA_5451: 13819 - Hypothetical Protein, at 122,441 to 123,785 13819 mRNA_5452: 13820 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 124,272 to 125,754 13820
Group Condition mRNA_5448 mRNA_5449 mRNA_5450 mRNA_5451 mRNA_5452
13816 13817 13818 13819 13820
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.4 +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.2 -0.2 +0.3
growth on ypd YPD -0.1 -0.2 +0.1 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.2 -0.1 +0.1 +0.2
auxotrophy Dropout Complete +0.0 -0.0 -0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 -0.1 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 -0.2 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.0 +0.3 -0.2 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 +0.0 +0.1 +0.1
growth on oleic acid YNB Glucose -0.0 +0.3 +0.0 -0.0 +0.2
auxotrophy YNB Glucose +0.0 -0.0 -0.1 +0.0 +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.4 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 -0.2 +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 -0.0 +0.0 +0.7
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