Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13819 and 13820 are separated by 486 nucleotides13820 and 13821 are separated by 787 nucleotides13821 and 13822 are separated by 166 nucleotides13822 and 13823 are separated by 63 nucleotides mRNA_5451: 13819 - Hypothetical Protein, at 122,441 to 123,785 13819 mRNA_5452: 13820 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 124,272 to 125,754 13820 mRNA_5453: 13821 - HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833, at 126,542 to 126,978 13821 mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127,145 to 127,753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127,817 to 128,320 13823
Group Condition mRNA_5451 mRNA_5452 mRNA_5453 mRNA_5454 mRNA_5455
13819 13820 13821 13822 13823
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 N.D. -1.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 N.D. -1.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.3 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.2 N.D. -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose -0.0 +0.2 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.4 N.D. -0.4 N.D.
growth on ypd YPD +0.0 +0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.1 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 N.D. +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.7 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.1 +0.4 N.D. +0.7 N.D.
auxotrophy YNB Glucose +0.0 +0.5 N.D. +0.9 N.D.
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