Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 13821 and 13822 are separated by 166 nucleotides13822 and 13823 are separated by 63 nucleotides13823 and 13824 are separated by 978 nucleotides13824 and 13825 are separated by 2095 nucleotides mRNA_5453: 13821 - HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833, at 126,542 to 126,978 13821 mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127,145 to 127,753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127,817 to 128,320 13823 mRNA_5456: 13824 - K07034 K07034 uncharacterized protein, at 129,299 to 130,839 13824 mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132,935 to 135,021 13825
Group Condition mRNA_5453 mRNA_5454 mRNA_5455 mRNA_5456 mRNA_5457
13821 13822 13823 13824 13825
ypd buoyancy 40 hrs Median Buoyancy N.D. -1.0 N.D. +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -1.1 N.D. +0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 N.D. -1.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.7 N.D. +0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.5 N.D. +0.4 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 N.D. +0.0 -0.5
growth on ricinoleic acid YNB Glucose N.D. -0.4 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. -0.5 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 N.D. -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 N.D. +1.2 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 N.D. +0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 N.D. +0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 N.D. -0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 N.D. -0.1 -0.2
growth on oleic acid YNB Glucose N.D. +0.1 N.D. +0.0 +0.1
growth on ypd YPD N.D. +0.1 N.D. -0.3 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. -0.0 +0.2
auxotrophy Dropout Complete N.D. +0.7 N.D. -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. +0.2 +0.4
auxotrophy YNB Glucose N.D. +0.9 N.D. +0.2 -0.1
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