Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13822 and 13823 are separated by 63 nucleotides13823 and 13824 are separated by 978 nucleotides13824 and 13825 are separated by 2095 nucleotides13825 and 13826 are separated by 753 nucleotides mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127,145 to 127,753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127,817 to 128,320 13823 mRNA_5456: 13824 - K07034 K07034 uncharacterized protein, at 129,299 to 130,839 13824 mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132,935 to 135,021 13825 mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135,775 to 137,466 13826
Group Condition mRNA_5454 mRNA_5455 mRNA_5456 mRNA_5457 mRNA_5458
13822 13823 13824 13825 13826
ypd buoyancy 40 hrs Median Buoyancy -1.0 N.D. +0.2 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -1.1 N.D. +0.3 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. +0.4 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -1.4 +0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. +1.2 -0.9 -0.1
growth on oleic acid YNB Oleic Acid -0.0 N.D. -0.2 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.4 +0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.2 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 N.D. +0.4 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.0 -0.5 +0.7
growth on oleic acid YNB Glucose +0.1 N.D. +0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.5 +0.1 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.6 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.1 +0.3 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. -0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.1 +0.0 +0.9
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.0 +0.2 +0.4
growth on ypd YPD +0.1 N.D. -0.3 +0.4 +0.6
auxotrophy Dropout Complete +0.7 N.D. -0.1 +0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. +0.2 +0.4 +0.3
auxotrophy YNB Glucose +0.9 N.D. +0.2 -0.1 +0.7
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