Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13827 and 13828 are separated by 453 nucleotides13828 and 13829 are separated by 562 nucleotides13829 and 13830 are separated by 331 nucleotides13830 and 13831 are separated by 550 nucleotides mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137,712 to 142,307 13827 mRNA_5460: 13828 - Hypothetical Protein, at 142,761 to 144,304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144,867 to 148,106 13829 mRNA_5462: 13830 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 148,438 to 149,863 13830 mRNA_5463: 13831 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 150,414 to 154,047 13831
Group Condition mRNA_5459 mRNA_5460 mRNA_5461 mRNA_5462 mRNA_5463
13827 13828 13829 13830 13831
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.4 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.2 +0.0 +0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 +0.1 +0.0 +0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.3 -1.0 +0.2 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.2 -0.0 -0.0 +0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.4 -0.0 +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.1 -0.0 -0.3 +0.0
growth on oleic acid YNB Glucose -0.6 +0.2 +0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.0 -0.1 +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 -0.1 +0.1 +0.4
auxotrophy Dropout Complete -0.8 +0.6 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.1 +0.1 +0.1
growth on ypd YPD +0.6 -0.0 -0.0 +0.1 +0.0
auxotrophy YNB Glucose -0.2 +0.8 +0.2 +0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +1.0 +0.2 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.1 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.9 +0.2 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +1.7 -0.2 -0.1 +0.6 -0.1
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