Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13828 and 13829 are separated by 562 nucleotides13829 and 13830 are separated by 331 nucleotides13830 and 13831 are separated by 550 nucleotides13831 and 13832 are separated by 953 nucleotides mRNA_5460: 13828 - Hypothetical Protein, at 142,761 to 144,304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144,867 to 148,106 13829 mRNA_5462: 13830 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 148,438 to 149,863 13830 mRNA_5463: 13831 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 150,414 to 154,047 13831 mRNA_5464: 13832 - K09579 PIN4 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, at 155,001 to 155,781 13832
Group Condition mRNA_5460 mRNA_5461 mRNA_5462 mRNA_5463 mRNA_5464
13828 13829 13830 13831 13832
growth on ricinoleic acid YNB Glucose -1.0 +0.2 +0.3 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.0 -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.4 -0.0 +0.1 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 +0.1 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.3 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.0 +0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.2 +0.2 N.D.
growth on ypd YPD -0.0 -0.0 +0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 -0.0 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.0 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 +0.6 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.1 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.1 +0.1 N.D.
growth on oleic acid YNB Glucose +0.2 +0.0 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.1 +0.1 N.D.
auxotrophy Dropout Complete +0.6 +0.1 -0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.9 +0.2 +0.0 -0.3 N.D.
auxotrophy YNB Glucose +0.8 +0.2 +0.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.0 +0.2 +0.1 -0.3 N.D.
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