Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13832 and 13833 are separated by 407 nucleotides13833 and 13834 are separated by 203 nucleotides13834 and 13835 are separated by 1639 nucleotides13835 and 13836 are separated by 5 nucleotides mRNA_5464: 13832 - K09579 PIN4 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, at 155,001 to 155,781 13832 mRNA_5465: 13833 - Hypothetical Protein, at 156,189 to 157,604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157,808 to 163,476 13834 mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165,116 to 166,451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166,457 to 167,011 13836
Group Condition mRNA_5464 mRNA_5465 mRNA_5466 mRNA_5467 mRNA_5468
13832 13833 13834 13835 13836
auxotrophy Dropout Complete N.D. +0.0 -0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 -0.9 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 +0.4 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 -0.4 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 -0.2 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.2 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.0 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.6 -0.5 +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.2 -0.0 +0.2
growth on ypd YPD N.D. -0.0 +0.1 +0.1 +0.1
auxotrophy YNB Glucose N.D. +0.1 -0.0 +0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 -0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid N.D. +0.9 -0.0 -0.3 -0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.1 +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.8 +0.0 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 +0.1 +0.1 +0.0
growth on oleic acid YNB Glucose N.D. +0.5 +0.0 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +0.2 +0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.8 +0.0 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +1.4 +0.2 +0.1 -0.3
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