Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 13835 and 13836 are separated by 5 nucleotides13836 and 13837 are separated by 104 nucleotides13837 and 13838 are separated by 220 nucleotides13838 and 13839 are separated by 516 nucleotides mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165,116 to 166,451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166,457 to 167,011 13836 mRNA_5469: 13837 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 167,116 to 168,617 13837 mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168,838 to 170,246 13838 mRNA_5471: 13839 - KOG4696 Uncharacterized conserved protein, at 170,763 to 172,785 13839
Group Condition mRNA_5467 mRNA_5468 mRNA_5469 mRNA_5470 mRNA_5471
13835 13836 13837 13838 13839
auxotrophy Dropout Complete -0.4 -0.3 +0.1 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.3 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 -0.2 -0.0 -0.5
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.2 -0.5 +0.1 +0.1
auxotrophy YNB Glucose +0.2 -0.0 -0.5 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 +0.1 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 -0.3 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 +0.2 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 -0.6 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 -0.3 +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.2 -0.4 -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.1 -0.4 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.3 -0.4 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.4 +0.0 -0.2
growth on oleic acid YNB Glucose +0.2 -0.0 -0.3 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.2 +0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 +0.3 +0.3 +0.0
growth on ypd YPD +0.1 +0.1 -0.3 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 -0.3 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 -0.1 +0.5 +0.1
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